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SIDRA

GXB

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Significant Genes


2.0 Fold Change

Disease

ER+ Breast Cancer (6)
 LN- Breast Cancer (4)
 Mixed Breast Cancer Types (7)

Sample Source

Breast Cancer Tissue (17)
 Centre Rene´ Huguenin, Saint-Cloud, France (1)
 Cleveland Clinic Foundation, Cleveland, OH, USA (1)
 Erasmus Medical Center (EMC), the Netherlands (2)
 Guys Hospital, London, UK (3)
 Institut Gustave Roussy, Villejuif, France (1)
 Institute Jules Bordet, Brussels, Belgium (1)
 Institute of Oncology, Ljubljana, Slovenia (1)
 Johannes Gutenberg University, Mainz, Germany (1)
 John Radcliffe Hospital, Oxford, UK (4)
 Karolinska Hospital, Stockholm, Sweden (2)
 Memorial Sloan-Kettering Cancer Center, NY, USA (1)
 Nagalla 2013 (17)
 National Cancer Institute, Bari, Italy (2)
 National University Hospital, Singapore (3)
 Technische Universitaet Muenchen, Germany (1)
 U C San Francisco Comprehensive Cancer Center (1)
 Uppsala University Hospital , Uppsala, Sweden (3)

Species

Homo sapiens (17)

Platform

Affymetrix HG-U133A (12)
 Affymetrix HG-U133B (3)
 Affymetrix HG-U133_Plus_2 (2)

Institution

GEO (17)

Gene Expression Browser

Sample Set Platform Species Disease Sample Source Sample Count  
Guy's hospital dataset (GUYT2) - GSE9195.GPL570.fCEL Homo sapiens ER+ Breast Cancer Nagalla 2013 ... 77
Guys hospital (GUYT) dataset- GSE6532.GPL570 Homo sapiens ER+ Breast Cancer Nagalla 2013 ... 87
John Radcliff Hospital (OXFU, OXFT) dataset- GSE6532.GPL96 Homo sapiens ER+ Breast Cancer Nagalla 2013 ... 327
John Radcliff Hospital (OXFU, OXFT) dataset- GSE6532.GPL97 Homo sapiens ER+ Breast Cancer Nagalla 2013 ... 327
Uppsala and Singapore dataset - GSE4922.GPL96 Homo sapiens Mixed Breast Cancer Types Breast Cancer Tissue ... 289
Uppsala and Singapore dataset - GSE4922.GPL97 Homo sapiens Mixed Breast Cancer Types Breast Cancer Tissue ... 289
Karolinska (STO) dataset - GSE1456.GPL96 Homo sapiens Mixed Breast Cancer Types Breast Cancer Tissue ... 159
Karolinska (STO) dataset - GSE1456.GPL97 Homo sapiens Mixed Breast Cancer Types Nagalla 2013 ... 159
Bordet Radcliffe NUH dataset - GSE45255.GPL96 Homo sapiens Mixed Breast Cancer Types Nagalla 2013 ... 139
University of California San Francisco (YAU) dataset - GSE7378.GPL4685 Homo sapiens ER+ Breast Cancer Breast Cancer Tissue ... 54
Erasmus Medical Center (EMC) dataset 1 - GSE2034.GPL96 Homo sapiens LN- Breast Cancer Nagalla 2013 ... 286
Erasmus Medical Center (EMC) dataset 2 - GSE5327.GPL96 Homo sapiens LN- Breast Cancer Breast Cancer Tissue ... 58
Europe and Cleveland (EMCT) dataset - GSE12093.GPL96 Homo sapiens ER+ Breast Cancer Nagalla 2013 ... 136
TRANSBIG (TBIG) dataset - GSE7390.GPL96 Homo sapiens LN- Breast Cancer Nagalla 2013 ... 198
Memorial Sloan-Kettering Cancer Center (MSKCC) dataset - GSE2603.GPL96_Clinical samples Homo sapiens Mixed Breast Cancer Types Breast Cancer Tissue ... 99
Nagalla 2013 reconstituted public dataset Homo sapiens Mixed Breast Cancer Types Breast Cancer Tissue ... 1839
Johannes Gutenberg University (MAINZ) dataset - GSE11121.GPL96 Homo sapiens LN- Breast Cancer Nagalla 2013 ... 200
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