SIDRA
Sample Set Annotation Tool
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Molecular Subtype
New Group
Split Group Set
Reset Group Set
View in Gene Expression Browser
Return to Annotation Tool
Groups
Normal
400003590: GSM107235
400003596: GSM107241
400003629: GSM107274
400003632: GSM107277
400003649: GSM107294
400003650: GSM107295
400003652: GSM107297
400003653: GSM107298
400003658: GSM107303
400003659: GSM107304
400003670: GSM107315
400003673: GSM107318
400003675: GSM107320
400003679: GSM107324
400003681: GSM107326
400003686: GSM107331
400003689: GSM107334
400003699: GSM107344
400003702: GSM107347
400003703: GSM107348
400003721: GSM107366
400003723: GSM107368
400003730: GSM107375
400003735: GSM107380
400003737: GSM107382
0
samples selected
Move selected samples to group
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Her2
400003587: GSM107232
400003604: GSM107249
400003617: GSM107262
400003624: GSM107269
400003635: GSM107280
400003639: GSM107284
400003648: GSM107293
400003660: GSM107305
400003695: GSM107340
400003697: GSM107342
400003707: GSM107352
400003708: GSM107353
400003711: GSM107356
400003719: GSM107364
400003720: GSM107365
400003722: GSM107367
400003725: GSM107370
400003733: GSM107378
400003742: GSM107387
0
samples selected
Move selected samples to group
Normal
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Basal
400003595: GSM107240
400003597: GSM107242
400003605: GSM107250
400003615: GSM107260
400003616: GSM107261
400003654: GSM107299
400003655: GSM107300
400003677: GSM107322
400003684: GSM107329
400003701: GSM107346
400003705: GSM107350
400003709: GSM107354
400003710: GSM107355
400003712: GSM107357
400003718: GSM107363
400003729: GSM107374
400003731: GSM107376
400003739: GSM107384
400003743: GSM107388
0
samples selected
Move selected samples to group
Normal
Her2
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumA
400003589: GSM107234
400003594: GSM107239
400003598: GSM107243
400003601: GSM107246
400003606: GSM107251
400003607: GSM107252
400003611: GSM107256
400003613: GSM107258
400003618: GSM107263
400003619: GSM107264
400003620: GSM107265
400003621: GSM107266
400003623: GSM107268
400003626: GSM107271
400003627: GSM107272
400003631: GSM107276
400003640: GSM107285
400003641: GSM107286
400003642: GSM107287
400003644: GSM107289
400003646: GSM107291
400003651: GSM107296
400003657: GSM107302
400003661: GSM107306
400003662: GSM107307
400003664: GSM107309
400003667: GSM107312
400003669: GSM107314
400003678: GSM107323
400003683: GSM107328
400003685: GSM107330
400003687: GSM107332
400003688: GSM107333
400003690: GSM107335
400003691: GSM107336
400003694: GSM107339
400003696: GSM107341
400003698: GSM107343
400003704: GSM107349
400003726: GSM107371
400003728: GSM107373
400003744: GSM107389
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumB
400003588: GSM107233
400003591: GSM107236
400003592: GSM107237
400003593: GSM107238
400003599: GSM107244
400003600: GSM107245
400003602: GSM107247
400003603: GSM107248
400003608: GSM107253
400003609: GSM107254
400003610: GSM107255
400003612: GSM107257
400003614: GSM107259
400003622: GSM107267
400003625: GSM107270
400003628: GSM107273
400003633: GSM107278
400003634: GSM107279
400003637: GSM107282
400003647: GSM107292
400003656: GSM107301
400003663: GSM107308
400003665: GSM107310
400003666: GSM107311
400003668: GSM107313
400003671: GSM107316
400003672: GSM107317
400003674: GSM107319
400003676: GSM107321
400003682: GSM107327
400003692: GSM107337
400003693: GSM107338
400003706: GSM107351
400003713: GSM107358
400003714: GSM107359
400003715: GSM107360
400003717: GSM107362
400003724: GSM107369
400003734: GSM107379
400003736: GSM107381
400003738: GSM107383
400003740: GSM107385
400003741: GSM107386
400003745: GSM107390
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
ClaudinLow
NA
All Samples
Move
Create sample set from this group
ClaudinLow
400003630: GSM107275
400003636: GSM107281
400003638: GSM107283
400003643: GSM107288
400003645: GSM107290
400003680: GSM107325
400003700: GSM107345
400003716: GSM107361
400003732: GSM107377
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
NA
All Samples
Move
Create sample set from this group
NA
400003727: GSM107372
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
All Samples
Move
Create sample set from this group
All Samples
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
Move
Create sample set from this group
Are you sure?
Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
Age At Initial Pathologic Diagnosis
Array Sample ID
Breast Cancer Cause Of Death
Disease Free Survival Event
Disease Free Survival Years
Distant Met Free Survival
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Molecular Subtype
Pathology T Stage
PR Status
Sample Title
Series
Survival Time Years
Tumor Size Cm
Vital Status
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Name
Display Order
Move
Move this group to
before
after
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Color
Create Groups
Split by
Age At Initial Pathologic Diagnosis
Array Sample ID
Breast Cancer Cause Of Death
Disease Free Survival Event
Disease Free Survival Years
Distant Met Free Survival
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Molecular Subtype
Pathology T Stage
PR Status
Sample Title
Series
Survival Time Years
Tumor Size Cm
Vital Status
(split into
1
groups)
Ex:
NA
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release