SIDRA
Sample Set Annotation Tool
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Molecular Subtype
New Group
Split Group Set
Reset Group Set
View in Gene Expression Browser
Return to Annotation Tool
Groups
Normal
400004995: GSM151264
400005007: GSM151276
400005009: GSM151278
400005011: GSM151280
400005021: GSM151290
400005022: GSM151291
400005035: GSM151304
400005038: GSM151307
400005039: GSM151308
400005053: GSM151322
400005055: GSM151324
400005056: GSM151325
400005062: GSM151331
400005064: GSM151333
400005068: GSM151337
400005070: GSM151339
0
samples selected
Move selected samples to group
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Her2
400005000: GSM151269
400005003: GSM151272
400005004: GSM151273
400005006: GSM151275
400005013: GSM151282
400005019: GSM151288
400005026: GSM151295
400005029: GSM151298
400005049: GSM151318
400005051: GSM151320
400005061: GSM151330
400005072: GSM151341
400005074: GSM151343
0
samples selected
Move selected samples to group
Normal
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Basal
400004990: GSM151259
400004992: GSM151261
400004998: GSM151267
400005002: GSM151271
400005005: GSM151274
400005018: GSM151287
400005027: GSM151296
400005028: GSM151297
400005030: GSM151299
400005031: GSM151300
400005032: GSM151301
400005033: GSM151302
400005037: GSM151306
400005040: GSM151309
400005067: GSM151336
400005069: GSM151338
400005071: GSM151340
0
samples selected
Move selected samples to group
Normal
Her2
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumA
400004993: GSM151262
400004994: GSM151263
400004996: GSM151265
400005010: GSM151279
400005014: GSM151283
400005023: GSM151292
400005024: GSM151293
400005025: GSM151294
400005034: GSM151303
400005036: GSM151305
400005042: GSM151311
400005043: GSM151312
400005045: GSM151314
400005047: GSM151316
400005050: GSM151319
400005052: GSM151321
400005054: GSM151323
400005060: GSM151329
400005063: GSM151332
400005065: GSM151334
400005066: GSM151335
400005073: GSM151342
400005076: GSM151345
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumB
400004991: GSM151260
400004997: GSM151266
400005008: GSM151277
400005012: GSM151281
400005015: GSM151284
400005016: GSM151285
400005017: GSM151286
400005020: GSM151289
400005041: GSM151310
400005044: GSM151313
400005046: GSM151315
400005048: GSM151317
400005057: GSM151326
400005058: GSM151327
400005059: GSM151328
400005075: GSM151344
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
ClaudinLow
NA
All Samples
Move
Create sample set from this group
ClaudinLow
400005001: GSM151270
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
NA
All Samples
Move
Create sample set from this group
NA
400004999: GSM151268
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
All Samples
Move
Create sample set from this group
All Samples
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
Move
Create sample set from this group
Are you sure?
Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
Age At Initial Pathologic Diagnosis
Array Sample ID
Disease Free Survival Days
Disease Free Survival Event
Distant Met Free Survival Days
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Pathology T Stage
PR Status
Sample Title
Series
Tumor Size Cm
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Name
Display Order
Move
Move this group to
before
after
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Color
Create Groups
Split by
Age At Initial Pathologic Diagnosis
Array Sample ID
Disease Free Survival Days
Disease Free Survival Event
Distant Met Free Survival Days
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Pathology T Stage
PR Status
Sample Title
Series
Tumor Size Cm
(split into
34
groups)
Ex:
46, 71, 58, 57, 69
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release