SIDRA
Sample Set Annotation Tool
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Molecular Subtype
New Group
Split Group Set
Reset Group Set
View in Gene Expression Browser
Return to Annotation Tool
Groups
Normal
400003431: GSM107075
400003437: GSM107081
400003470: GSM107114
400003473: GSM107118
400003490: GSM107135
400003491: GSM107136
400003493: GSM107138
400003494: GSM107139
400003499: GSM107144
400003500: GSM107145
400003511: GSM107156
400003514: GSM107159
400003516: GSM107161
400003520: GSM107165
400003522: GSM107167
400003527: GSM107172
400003530: GSM107175
400003540: GSM107185
400003543: GSM107188
400003544: GSM107189
400003562: GSM107207
400003564: GSM107209
400003571: GSM107216
400003576: GSM107221
400003578: GSM107223
0
samples selected
Move selected samples to group
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Her2
400003428: GSM107072
400003445: GSM107089
400003458: GSM107102
400003465: GSM107109
400003476: GSM107121
400003480: GSM107125
400003489: GSM107134
400003501: GSM107146
400003536: GSM107181
400003538: GSM107183
400003548: GSM107193
400003549: GSM107194
400003552: GSM107197
400003560: GSM107205
400003561: GSM107206
400003563: GSM107208
400003566: GSM107211
400003574: GSM107219
400003583: GSM107228
0
samples selected
Move selected samples to group
Normal
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
Basal
400003436: GSM107080
400003438: GSM107082
400003446: GSM107090
400003456: GSM107100
400003457: GSM107101
400003495: GSM107140
400003496: GSM107141
400003518: GSM107163
400003525: GSM107170
400003542: GSM107187
400003546: GSM107191
400003550: GSM107195
400003551: GSM107196
400003553: GSM107198
400003559: GSM107204
400003570: GSM107215
400003572: GSM107217
400003580: GSM107225
400003584: GSM107229
0
samples selected
Move selected samples to group
Normal
Her2
LumA
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumA
400003430: GSM107074
400003435: GSM107079
400003439: GSM107083
400003442: GSM107086
400003447: GSM107091
400003448: GSM107092
400003452: GSM107096
400003454: GSM107098
400003459: GSM107103
400003460: GSM107104
400003461: GSM107105
400003462: GSM107106
400003464: GSM107108
400003467: GSM107111
400003468: GSM107112
400003472: GSM107117
400003481: GSM107126
400003482: GSM107127
400003483: GSM107128
400003485: GSM107130
400003487: GSM107132
400003492: GSM107137
400003498: GSM107143
400003502: GSM107147
400003503: GSM107148
400003505: GSM107150
400003508: GSM107153
400003510: GSM107155
400003519: GSM107164
400003524: GSM107169
400003526: GSM107171
400003528: GSM107173
400003529: GSM107174
400003531: GSM107176
400003532: GSM107177
400003535: GSM107180
400003537: GSM107182
400003539: GSM107184
400003545: GSM107190
400003567: GSM107212
400003569: GSM107214
400003585: GSM107230
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumB
ClaudinLow
NA
All Samples
Move
Create sample set from this group
LumB
400003429: GSM107073
400003432: GSM107076
400003433: GSM107077
400003434: GSM107078
400003440: GSM107084
400003441: GSM107085
400003443: GSM107087
400003444: GSM107088
400003449: GSM107093
400003450: GSM107094
400003451: GSM107095
400003453: GSM107097
400003455: GSM107099
400003463: GSM107107
400003466: GSM107110
400003469: GSM107113
400003474: GSM107119
400003475: GSM107120
400003478: GSM107123
400003488: GSM107133
400003497: GSM107142
400003504: GSM107149
400003506: GSM107151
400003507: GSM107152
400003509: GSM107154
400003512: GSM107157
400003513: GSM107158
400003515: GSM107160
400003517: GSM107162
400003523: GSM107168
400003533: GSM107178
400003534: GSM107179
400003547: GSM107192
400003554: GSM107199
400003555: GSM107200
400003556: GSM107201
400003558: GSM107203
400003565: GSM107210
400003575: GSM107220
400003577: GSM107222
400003579: GSM107224
400003581: GSM107226
400003582: GSM107227
400003586: GSM107231
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
ClaudinLow
NA
All Samples
Move
Create sample set from this group
ClaudinLow
400003471: GSM107115
400003477: GSM107122
400003479: GSM107124
400003484: GSM107129
400003486: GSM107131
400003521: GSM107166
400003541: GSM107186
400003557: GSM107202
400003573: GSM107218
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
NA
All Samples
Move
Create sample set from this group
NA
400003568: GSM107213
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
All Samples
Move
Create sample set from this group
All Samples
0
samples selected
Move selected samples to group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
Move
Create sample set from this group
Are you sure?
Are you sure you want to delete this group?
New Group
Name
Split Group Set
Split Using
Age At Initial Pathologic Diagnosis
Array Sample ID
Breast Cancer Cause Of Death
Disease Free Survival Event
Disease Free Survival Years
Distant Met Free Survival
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Molecular Subtype
Pathology T Stage
PR Status
Sample Title
Series
Survival Time Years
Tumor Size Cm
Vital Status
Reset Group Set
This will remove all current groups and create one group with all samples! Are you sure you want to reset?
Create Subset
Select which information you'd like to copy from the current sample set to your new subset.
Options
Copy all annotations
Copy all files
Group Settings
Group
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Name
Display Order
Move
Move this group to
before
after
Normal
Her2
Basal
LumA
LumB
ClaudinLow
NA
All Samples
Move
Color
Create Groups
Split by
Age At Initial Pathologic Diagnosis
Array Sample ID
Breast Cancer Cause Of Death
Disease Free Survival Event
Disease Free Survival Years
Distant Met Free Survival
Distant Met Free Survival Event
DMFS 10Y EVENT
DMFS 10Y TIME
ER Status
Histology Differentiation Grade
IBS
ICR
IDS
IMS
Lymph Node Status
Molecular Subtype
Pathology T Stage
PR Status
Sample Title
Series
Survival Time Years
Tumor Size Cm
Vital Status
(split into
1
groups)
Ex:
NA
Name by
Appending column name to group name
Using column name
Create Groups
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1.70.7-stable-gxb1-release